AmberTutorials
Contents
Modular Tutorials
ForceField Tutorials
Alchemical Free Energy (AFE) Tutorials
Free Energy Surface Tutorials
Basic umbrella sampling in sander
Machine Learning Tutorials
Miscellaneous Tutorials
Workshop Materials
Internal guides
In Progress Tutorials
AmberTutorials
Modular Tutorials
Free Energy Surface Tutorials
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Free Energy Surface Tutorials
Free Energy Surface Tutorials
Basic umbrella sampling in sander
Learning objectives
Relevant literature
Tutorial
Modifying the mdin file
Defining restraints in the disang file
Preparing the files needed for a 1-dimensional umbrella sampling